Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 51271
Gene Symbol: UBAP1
UBAP1
0.340 GeneticVariation disease BEFREE Truncating variants in UBAP1 associated with childhood-onset nonsyndromic hereditary spastic paraplegia. 31696996 2020
Entrez Id: 81631
Gene Symbol: MAP1LC3B
MAP1LC3B
0.010 Biomarker disease BEFREE <b>Abbreviations</b>: AP: adaptor protein; AP4B1: adaptor-related protein complex AP-4, beta 1; AP4E1: adaptor-related protein complex AP-4, epsilon 1; ATG: autophagy-related; EBSS: Earle's balanced salt solution; ER: endoplasmic reticulum; GFAP: glial fibrillary acidic protein; GOLGA1/Golgin-97/GOLG97: golgi autoantigen, golgin subfamily a, 1; GOLGA2/GM130: golgi autoantigen, golgin subfamily a, 2; HSP: hereditary spastic paraplegia; LC3/MAP1LC3B: microtubule-associated protein 1 light chain 3 beta; MAP2: microtubule-associated protein 2; MAPK8IP1/JIP1: mitogen-acitvated protein kinase 8 interacting protein 1; NEFH/NF200: neurofilament, heavy polypeptide; RBFOX3/NeuN (RNA binding protein, fox-1 homolog [C. elegans] 3); SQSTM1/p62: sequestosome 1; TGN: trans-Golgi network; WIPI2: WD repeat domain, phosphoinositide interacting protein 2. 31142229 2020
Entrez Id: 476
Gene Symbol: ATP1A1
ATP1A1
0.010 GeneticVariation disease BEFREE Here, we describe the first case of hereditary spastic paraplegia (HSP) caused by a novel de novo (p.L337P) variant in ATP1A1. 31705535 2020
Entrez Id: 79152
Gene Symbol: FA2H
FA2H
0.570 Biomarker disease BEFREE Biallelic pathogenic variants in FA2H gene have been repeatedly described as a cause of hereditary spastic paraplegia (HSP) type35 (SPG35). 30446360 2019
Entrez Id: 79152
Gene Symbol: FA2H
FA2H
0.570 GeneticVariation disease BEFREE In humans it has been associated with phenotypes from the neurodegeneration with brain iron accumulation (fatty acid hydroxylase-associated neurodegeneration, FAHN), hereditary spastic paraplegia (HSP type SPG35) and leukodystrophy (leukodystrophy with spasticity and dystonia) spectrum. 31135052 2019
Entrez Id: 11160
Gene Symbol: ERLIN2
ERLIN2
0.430 GeneticVariation disease BEFREE Mutations in genes encoding the neuronal isoform of the inositol 1,4,5-trisphosphate receptor (ITPR1) and genes involved in inositol 1,4,5-trisphosphate receptor degradation (ERLIN1, ERLIN2) are known to cause hereditary spastic paraplegia (HSP) and cerebellar ataxia. 31636353 2019
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.400 Biomarker disease BEFREE New hypothesis for the etiology of SPAST-based hereditary spastic paraplegia. 31108029 2019
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.400 Biomarker disease BEFREE Mutational Spectrum of Spast (Spg4) and Atl1 (Spg3a) Genes In Russian Patients With Hereditary Spastic Paraplegia. 31594988 2019
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.400 GeneticVariation disease BEFREE An extensive genetic analysis identified a specific class of heterozygous germline mutation in SPAST, p.(Arg499His), which is responsible for hereditary spastic paraplegia with infantile onset. 31698101 2019
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.400 GeneticVariation disease BEFREE Mutations in the gene encoding the microtubule severing ATPase spastin are the most frequent cause of hereditary spastic paraplegia, a genetic condition characterised by length-dependent axonal degeneration. 31587092 2019
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.400 GeneticVariation disease BEFREE Novel mutations in the SPAST gene cause hereditary spastic paraplegia. 31751864 2019
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.400 Biomarker disease BEFREE <i>MiR-33a</i> is a therapeutic target in SPG4-related hereditary spastic paraplegia human neurons. 30777884 2019
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.400 Biomarker disease BEFREE Even though SPAST is well known as a regulator of the axon growth and arborization in neurons and a genetic factor of hereditary spastic paraplegia, it also takes part in a wide range of other cellular functions including the regulation of cell division and proliferation. 31150727 2019
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.400 GeneticVariation disease BEFREE SPAST mutations are the most common cause of hereditary spastic paraplegia (SPG4-HSP), which is characterized by progressive lower limb weakness, spasticity and hyperreflexia. 30489674 2019
Entrez Id: 80208
Gene Symbol: SPG11
SPG11
0.400 Biomarker disease BEFREE Spastic paraplegia gene 11(SPG11)-linked hereditary spastic paraplegia is a complex monogenic neurodegenerative disease that in addition to spastic paraplegia is characterized by childhood onset cognitive impairment, thin corpus callosum and enlarged ventricles. 30476097 2019
Entrez Id: 65055
Gene Symbol: REEP1
REEP1
0.400 Biomarker disease BEFREE SPG31 is a hereditary spastic paraplegia (HSP) caused by pathogenic variants in the REEP1 gene. 30637453 2019
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.400 GeneticVariation disease BEFREE Mutations of the SPAST gene, which encodes the microtubule-severing protein spastin, are the most common cause of hereditary spastic paraplegia (HSP). 30520996 2019
Entrez Id: 51062
Gene Symbol: ATL1
ATL1
0.400 GeneticVariation disease BEFREE Deletion of ATL results in long unbranched ER tubules in cells, and mutation of human ATL1 is linked to hereditary spastic paraplegia. 31239341 2019
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.400 GeneticVariation disease BEFREE The AAA+ ATPase spastin remodels microtubule arrays through severing and its mutation is the most common cause of hereditary spastic paraplegias (HSP). 31285604 2019
Entrez Id: 51062
Gene Symbol: ATL1
ATL1
0.400 Biomarker disease BEFREE Mutational Spectrum of Spast (Spg4) and Atl1 (Spg3a) Genes In Russian Patients With Hereditary Spastic Paraplegia. 31594988 2019
Entrez Id: 80208
Gene Symbol: SPG11
SPG11
0.400 GeneticVariation disease BEFREE ZFYVE26/SPASTIZIN and SPG11/SPATACSIN mutations in hereditary spastic paraplegia types AR-SPG15 and AR-SPG11 have different effects on autophagy and endocytosis. 30081747 2019
Entrez Id: 51062
Gene Symbol: ATL1
ATL1
0.400 GeneticVariation disease BEFREE Mutant alleles of Atlastin-1 found in Hereditary Spastic Paraplegia (HSP) patients show similar ER phenotypes, suggesting that neuronal ER impairment contributes to HSP disease pathogenesis. 30718476 2019
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.400 GeneticVariation disease BEFREE Mutations in the SPAST gene causing hereditary spastic paraplegia are related to global topological alterations in brain functional networks. 30737580 2019
Entrez Id: 23503
Gene Symbol: ZFYVE26
ZFYVE26
0.390 GeneticVariation disease BEFREE ZFYVE26/SPASTIZIN and SPG11/SPATACSIN mutations in hereditary spastic paraplegia types AR-SPG15 and AR-SPG11 have different effects on autophagy and endocytosis. 30081747 2019
Entrez Id: 10908
Gene Symbol: PNPLA6
PNPLA6
0.390 GeneticVariation disease BEFREE Loss-of-function mutations in the human NTE gene have been associated with a spectrum of neurodegenerative disorders such as hereditary spastic paraplegia, ataxia and chorioretinal dystrophy. 31835418 2019